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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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A Collaboration to Improve Plant Genome Annotations Across Species
… targets for plant improvement. Surprisingly, about 16 to 56 percent of plant genes are poorly characterized, … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function … additional biological information. As I’ve said earlier, 16 to 56 percent of plant genes are poorly characterized. So …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint … capacity. Additionally, the call recommended including plans to analyze and distribute data through the  DOE … a small-scale white paper focused on duckweed through the  CSP New Investigator call . It is the first project to have …
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to … the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high quality … seven novel species of Acidobacteria through an approved CSP proposal. The researchers found that these species …
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Silver age of GOLD introduces new features
… new features like a public API and ecosystem landing page, as well as the growth of different entities,  further …
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How Maize Makes An Antibiotic Cocktail
… Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  … a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a fellowships provided …
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A User-Centered Approach to Accessing JGI Data
… program,” he said. “If each kingdom submits the same category of data (key) for their files as a baseline, we can …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Clustering Categorical Data
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A More Intuitive Phytozome Interface
… over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome v13. Below … will be forwarded ( where possible ) to their corresponding pages at  https://phytozome-next.jgi.doe.gov . If a genome …
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Annual Meeting 2027
…   Save the Date: March 16–18, 2027 The next JGI Annual Meeting will be held in March 2027 at the Oakland Convention Center. Check this page as further details become available. Sign up for our …
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JGI Announces 2023 Community Science Program Awardees
… very excited to start working with this years’ crop of CSP recipients, over half of which are first-time PIs on a … and we look forward to facilitating their success. “ The CSP Annual Call is focused on large-scale genomic science … (Courtesy of Mary-Cathrine Leewis) This year’s annual CSP call had five areas of emphasis: genes to function, …
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