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… first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … and Higher Education at Ensenada (CICESE) in her first microbial ecology paper in the journal PLoS One . “Puerto … UC Merced graduate students who participated in the Summer 2015 research experience at the JGI as part of an education …

Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we …

Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … and lignocellulose degradation encoded in the genome sequence of  Schizophyllum commune . Nat Biotech.  2010; 28: …

In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … Program Defining the vast landscape of gene regulatory sequences in the human genome. Understanding how variation … Scientific Achievement 2017-  Adjunct Professor UC-Berkeley 2015-  Co-Chair, “Advances in Genome Biology & …

… direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …

Analysis reveals the microbial community involved in a bioremediation effort. The … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified … and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy (DOE) Joint …

… and reverse genetics to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth … user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev Micro 22, 63. Davidi L, …

… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral …

… integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …

… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into …