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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological … that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of the …
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Microbiome Data Science Team
… into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. … in tackling grand challenges in Biology, with a special focus on microbiome research.  These efforts include … global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… the world’s rivers and their microbial communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with me to talk about his project, and riffed a bit on what it means in a … ED: I mean I really think we’re at a unique time in human history, where we’re moving from when my father was born, of …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … to the Team Proposal tab to submit. For more information about the 2019 GPU Hackathons, go to:  …
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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JGI Scientists Pen Genome Watch Articles
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … .  The latest article, published January 27, is about engineering plants and their microbiomes for more … the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy (DOE) partnered with … health. Three DOE national labs had people and resources focused on three human chromosomes: Lawrence Berkeley National … researchers were studying Chromosome 5, which contains about 6% of the human genome . They discovered genes linked …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of … are crucial for advancing the bioeconomy, environmental sustainability, and improving bioenergy crops. … The Metabolomics Program is focused on understanding the critical roles of metabolites in … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … cut its greenhouse gas emissions in half, relative to its 2015 baseline emissions.  Reaching that goal will mean … Members from across Berkeley Lab gathered to learn more about planting and tending these shoots of their own. The …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last … plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … current Data Restriction Policy requires that users know about the FY Funding Year, and the publication status in …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain … sorghum’s survival secrets could change not only how we use and grow sorghum, but other important crops as well. In …
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Minimum Information about a Biosynthetic Gene cluster
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