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The Metagenome of an Anaerobic Microbial Community Decomposing Poplar Wood Chips
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Influences of Climate on Phyllosphere Endophytic Bacterial Communities of Wild Poplar
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Natural Prodcast Episode 17: Cassandra Quave
… it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of … question. I don’t know how amenable plants are really to a genome-based approach for screening. I think a lot of our … these studies are lacking that. And so there’s no way to be 100% sure that the chemistry that they’re even reporting on …
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Plant Program
… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … Plant Flagship Genomes are selected through discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI … services through a user-facility model.  doi: 10.2172/3014442 …
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Igor Grigoriev
… of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the … Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched …
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Draft Genome Sequence of Streptomyces sp. Strain Wigar10, Isolated from a Surface-Sterilized Garlic Bulb
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High-Resolution Linkage Map and Chromosome-Scale Genome Assembly for Cassava (Manihot esculenta Crantz) from 10 Populations
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FLOWERING LOCUS T duplication coordinates reproductive and vegetative growth in perennial poplar
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Comparative transcriptomics uncovers poplar and fungal genetic determinants of ectomycorrhizal compatibility
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A Community Resource for Secondary Metabolite Researchers
… over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … is already the most comprehensive BGC database available at 10X the scale of the closest comparable database, and has …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Rex Malmstrom
… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … viruses. Nature Comm . 9 (1), 4881 Tsementzi, D. et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen …
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