Search

… A special issue of Synthetic Biology celebrates research enabled by the JGI … and synthesis work. This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … One review article in the collection, Genomics-enabled analysis of specialized metabolism in bioenergy crops: …

… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they are “polyploid”) and their complex … to sequence and assemble, in turn limiting the use of modern, genomic breeding in these crops. For diploid …

… single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … genomes than many bacteria. Until recently, understanding of giant viruses came primarily from sampling an … approaches to gain insight into the  genomes of giant viruses. In a new review, researchers from the U.S. …

… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …

… Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral … methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of …

… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors … that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics … Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab …

… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … how KBase (www.kbase.us) can support biological data analysis. It is a free, open source analytics platform … the 500-gigabase cap and that you don’t request outside of the sample range that’s listed. Q: What are the pros and …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … alga genome) and  MycoCosm (for the fungus genome) to aid analysis. Many of the results were unexpected. For example, … the lichen partners. This genomic and transcriptomic analysis has opened the door for more incisive …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and increase its length by 29.5 Megabasepairs. 2017: Pan-genome analysis of sorghum begins. Enabled by the JGI’s Community …

… the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse disciplines to highlight how they … – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the JGI …

… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” … a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … The work conducted by the U.S. Department of Energy Joint Genome …