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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs … the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory (ORNL) sponsored by the Office of Biological and Environmental Research at the United States Department of Energy (DOE) …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was … working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for directed finishing and co-led … to learn more about the program's areas of focus, major initiatives and more.  …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … 1933521), the Nebraska Tobacco Settlement Biomedical Research Enhancement Funds as part of a startup grant of the …
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Draft Genome Sequence of Methylocapsa palsarum NE2T, an Obligate Methanotroph from Subarctic Soil
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our … from a number of universities and organizations. From field research and wet lab experiments, to computational modeling …
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A User-Centered Approach to Accessing JGI Data
… (https://data.jgi.doe.gov/) launched last year, it was only accessible through the plant portal  Phytozome . Now … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … The JGI Data Portal currently allows users to find files by searching file metadata (info describing the files) We are …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … by the United States Department of Agriculture National Institute of Food and Agriculture grant …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … by the U.S. Department of Energy Office of Science under Contract No. DE-AC02-05CH11231 …
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Waiting to Respire
… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … As reported January 28, 2019 in Nature Communications , two research teams joined forces and data sets to describe …
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Corals in Hot Water Get Help From Their Microbes
… As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a … When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take the …
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Mateus Fiamenghi
… Mateus’s research is focusing on the identification and analysis of …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … was also supported the grant #2016/23218-0 from São Paulo Research Foundation (FAPESP). A.P.C. received a scholarship …
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