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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … data, approximately half of which was generated by the JGI, to uncover these DGRs. DGRs were found in single … study’s publicly available dataset gives researchers the opportunity to study how DGRs work and develop more of them …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … students and eight graduate students, hosted by 18 JGI staff. One of the mentors, postdoc Yumary Vasquez, was … working with high performance computing and had an amazing opportunity to collaborate and network with talented …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for … methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to studying …
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Introduction: Sequences and consequences
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Targeted single‐cell sequencing
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JGIota: Sequencing Shiitakes with David Hibbett
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Mapping Heat Resistance in Yeasts
… Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … aim to improve our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but … reciprocal hemizygosity analysis via sequencing (RH-Seq). Strains of S. cerevisiae and S. paradoxus were first used to …
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Georg Rath
… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and … of representatives from JGI’s science and production sequencing programs. …
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric … cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops novel flow cytometry protocols …
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