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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … into multiple interconnected layers. The architecture of these algorithms, inspired by communication networks …
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2021 Progress Report
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP allows researchers to go … by weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers …
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2025 NeLLi Symposium
Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … researchers to discover novel lineages of life and move from the identification of microbial novelty to assigning … challenge. This symposium series will provide an overview of the bacterial, archaeal and microeukaryote diversity …
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JGI announces second round of 2023 New Investigator awardees
From left to right: [above] Emma Bell, Mallory Choudoir, … is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … for 2023. Proposals are accepted year-round; the next review will be conducted in November.  …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, … You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … is Sept. 9, 2025, for inclusion in the November 2025 review. You can also find more information about the JGI’s  …
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JGI & KBase at PAG XXVII
January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … BER Plant Genomic Science Workshop Agenda: 6:20 PM Overview and Joint Genome Institute Plant Program Update 6:33 PM …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into … synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
While summer interns at the JGI from multiple programs had their own goals to achieve, they constantly collaborated with each other on new ways of presenting and researching science. …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… with excitement and determination as they came onsite. From data carpentry to science communications, their … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t …
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