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Virus Discoveries that Keep Getting Bigger
… phylum. As a group, giant viruses infect a wide array of microeukaryotes, from algae to heterotrophic … methods, researchers have shed light on the genetic makeup of new giant viruses. This review highlights … option to discovering giant viruses. Further, single-marker gene based surveys allow researchers to use signature genes, …
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Tracing the Evolution of Shiitake Mushrooms
… enzymes these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake … The enzymes that Lentinula fungi rely on to decay wood were widely conserved across species. Specifically, many species … Genome and transcriptome sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… to recover high value products from human waste. They   genetically modified yeast to efficiently convert elements … to create hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led … Materials strategic initiative aims to enable the JGI user community to participate in the development and …
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SPRUCE-ing Up Science
… fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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JGI announces final round of 2022 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final … the next deadline is July 31. You can learn more about our Community Science Program here .  …
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Introducing New Members of the JGI User Executive Committee
… fail to represent the needs of large parts of the user community. “Large sections of the community are either unaware that [public but … use-restricted data without contacting the lab that generated that data,” he said in his candidate statement. “I …
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A Natural Mechanism Can Turbocharge Viral Evolution
… that had in their genomes a surprising tool: a “diversity generating retroelement,” or DGR. The DGR could mutate the … been found in other viruses, bacteria, and archaea. But how widely distributed they are, and the roles that they might … a fishing line, without harming the rest of the microbial community. The study’s publicly available dataset gives …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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JGI Welcomes New UEC Members
… JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice …
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Global metagenomics reveals plastid diversity and unexplored algal lineages
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First Monoploid Reference Sequence of Sugarcane
… in these crops. For diploid species, sequencing programs generally focus on a genotype with two identical sets of … fuels. While more than half of the ethanol produced worldwide comes from the United States, Brazil produces a quarter … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in …
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