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JGI announces second round of 2023 New Investigator awardees
… From left to right: [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin … Ren, Allison Rober, Neal Scott, Chikae Tatsumi, Vojtech Tlaskal, Fernando Torralbo, Luis Felipe Valdez-Nuñez  The JGI … find a list of the second round of researchers accepted for 2023. Proposals are accepted year-round; the next review …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the … and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his … work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC … of transposons and 5mC in fungi could help researchers find ways to protect poplar and other crops being considered for … and computational resources, respectively. This work was supported by the Office of the Vice President for …
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, Michael Borg, Rory Craig, Nicholas Darci-Maher, Lital Davidi, Colleen J. Doherty, Adrian A. … a list of researchers whose proposals were accepted for 2026. With the JGI's resources, these researchers will …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science … a single set of chromosomes, are available. The genome assemblies highlight the multiple advances in sequencing … contamination, and drought. The moss genomes’ metabolic pathways could lead to the discovery of genes that could be used …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by … At the Joint Genome Institute, Dr. Cole’s research focus has been on understanding how microbes can colonize plant …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for … extensive experience in Laboratory Information Management Systems (LIMS), bioinformatics, and genomics data … BS in Electrical Engineering, University of New South Wales, Australia; MS …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects of research questions Another intern summer has … postdoc Yumary Vasquez, was herself a program alum from the 2022 cohort.  The UC Merced interns attended professional …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing … services, bees eat plant nectar and pollen. Nectar is an easily absorbable solution of sugars. But pollen contains … processes? Now, an international team of researchers has identified the major metabolic roles of constituent …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user … in studies of complex biological and environmental systems. We optimize our service to the community through …
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