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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … high-quality genomic information using minute quantities of DNA derived from individual environmental cells. The proof …
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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Learning to Look
Machine learning approach significantly expands inovirus … which are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … phages!” said Krupovic. “We can now start inquiring into their impact on microbial communities in the …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first step in the deadly … opportunity to study how DGRs work and develop more of them into new biological tools. … The work conducted by the U.S. …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism may …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism may …
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Three Join the JGI User Executive Committee
… of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full roster of members. … in metagenomics and novel applications for long-read DNA sequencing. As a UEC member, Wilbanks will advocate for …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on presentations to peatlands … 2013, this field was just beginning to develop and expand into the world of evolutionary biology. And around that …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… giant viruses that belong to the nucleocytoplasmic large DNA viruses (NCLDV) supergroup. The expansion of the … for large and giant viruses offered the researchers insights into how they might interact with their hosts, and how those …
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Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128T)
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