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… patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and … intimidating. That first exposure from great interactions with Dr. Ben Cole and Dr. Axel Visel led to being co-advised … advanced in my understandings than I would be at this stage without the internship and mentorship that followed. I …

… switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic … tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts comparative genomic research to understand the …

… funded by the National Science Foundation (NSF) and supports underrepresented minorities in science, technology, … and math (STEM) fields. This summer, they worked with Zhong Wang’s and Tanja Woyke’s groups, respectively. Each of the interns spoke briefly about …

… these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of … evaluates multiple predictions to reliably match viruses with their archaea and bacteria hosts. The Impact Within the … data. In other environments, such as terrestrial soil, having additional isolates and metagenomic datasets …

… biofuels thanks to its drought and flood hardiness. Even with little water, full sunlight and hot temperatures, … and the first C4 crop to be fully analyzed. 2014: The JGI updates its Sorghum bicolor reference genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 plants for biofuel …

… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing … said JGI Chief Informatics Officer Kjiersten Fagnan of the upcoming event. “The tools we use to process and analyze …

… in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel … He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In … pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel insights into the …

… is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological … and lipidomics to make recommendations to best support the JGI user community. Schadt is an environmental …

… lead the Forest Pathology and Mycology Laboratory. Together with his colleague Douglas Schmidt and UC Davis professor … engaged the DOE Joint Genome Institute (JGI), with support of the US Department of Energy Office of Science, as … crisis implemented by the UC team was the development of a protocol for injecting a solution that bolsters the immune …

… of water help regulate. However, the microbes also interact with compounds like fertilizers and microplastics that might … 1,000 metagenomes and established standardized sequencing protocols so that researchers could compare results across … 3.8 trillion bases or Terabases of sequencing data, along with geochemical and geospatial measurements collected at …

… in urine to create hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was … with BER missions to provide the fundamental science to support innovations for bioproduction and advance their … a Laboratory-Directed Research and Development project supported by Berkeley Lab, JGI and Foundry researchers …

… National Laboratory (BNL) led a team that  identified a protein , PtrbHLH011, within poplar involved in plant growth, lignin production, and disease resistance.  The Impact With increased lignin and iron, engineered poplar can be … This work was supported by the U.S. Department of Energy, Office of …