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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project … BS in Electrical Engineering, University of New South Wales, Australia; MS in Computer Science, University of New …
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Type IV Pili‐Associated Secretion of a Biofilm Matrix Protein From Clostridium perfringens That Forms Intermolecular Isopeptide Bonds
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, Michael Borg, Rory … find a list of researchers whose proposals were accepted for 2026. With the JGI's resources, these researchers will … and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — from Antarctic …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. … regulation is critical to ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces … from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences … array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … (cDNA), reducing the amount of time it takes to produce a dataset from months to days and halving the total reagent …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … have done the groundbreaking work you’ve been reading about for years! And you can ask them about it! And they’re super … helpfulness and patience of my JGI PIs, having lots of data to play around with.” …
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Four Draft Single-Cell Genome Sequences of Novel, Nearly Identical Kiritimatiellaeota Strains Isolated from the Continental Deep Subsurface
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MGM Workshop at Fisabio Summer School 2026
… Register here for the workshop The MGM Workshop is Module 4 of the Fisabio Summer School.  The workshop is addressed to students … by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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