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JGI Announces 2025 New Investigator Portfolio
… from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, from alpine …
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User Executive Committee Charter
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, proposal review …
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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent … Internship … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii … Impact on Microbial Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and Arabidopsis …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support … PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. … Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available Phosphate from Phytate. Appl Environ …
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A Step Toward Controlling Soybean Rust
The United States  is the world’s leading soybean producer , and soybeans are used to produce … crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program … soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in …
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Expanding Virophage Diversity
… with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses … Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage … were found in diverse habitats including the air, plant rhizosphere, wastewater, and even animal and human …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … School of Medicine and her graduate work in microbial oceanography at Scripps Institution of Oceanography. She … focus, major initiatives and more.  … BS, Biochemistry and Cell Biology, University of California, San Diego ( magna …
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Microbial co-habitation and lateral gene transfer: what transposases can tell us
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone snails, UC Merced …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth … and new crop traits. Dr. Mouncey has successfully built integrated and highly effective multi-disciplinary … include strategic planning and ensuring program excellence. The Director represents the JGI to its various …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … the University of Maryland, Baltimore. Both projects will build on the researchers’ expertise in developing and … classifying viruses into groups that can be compared across studies, (ii) predicting which hosts these viruses are …
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