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Kjiersten Fagnan
… the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also … National Microbiome Data Collaborative: enabling microbiome science. Nat Rev Microbiol 18, 313–314 (2020). … Jacobsen and D. Skinner and N.J. 2014. Wright Extreme Data Science. Big Data and Extreme-Scale Computing Conference . …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … way from sequencing to functional characterization, and a project like this — an exciting project — we were able to extend our capabilities, …
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Modulation of sensory perception by hydrogen peroxide enables Caenorhabditis elegans to find a niche that provides both food and protection from hydrogen peroxide
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Filling in the Plant Tree of Life
… are from narrow swaths of the plant tree of life. One project aims to change that. …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and … at a high level as JGI transitioned from the Human Genome Project to gaining momentum as a national user facility. He … Your ethics always point due north.” Joe Harkins served as project lead on the new building that would eventually rise …
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SIPs with Standards
… Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … reusable, and more insightful, for the future of studying microbial communities.   …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional … researchers to submit white papers to the Community Science Program’s  Functional Genomics call for proposals .  … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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Expanding Virophage Diversity
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which … Center (NERSC) , which is supported by the Office of Science of the U.S. Department of Energy.     …
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MGM Workshop at Fisabio Summer School 2025
… professionals of biology, biomedical research, the health sciences and related fields who are interested in learning … will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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IMG Webinar Series
… Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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