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Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress
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Providing biological context for GWAS results using eQTL regulatory and co‐expression networks in Populus
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Unveiling a pervasive DNA adenine methylation regulatory network in the early-diverging fungus Rhizopus microsporus
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… an enzyme system that was previously only understood at a genetic level. Functional and structural experiments showed … operates. It works as a two-part complex, along with a regulatory accessory protein and multiple metallocofactors. … convertible to ethylene, he began looking into the genetic foundations of what would become the MAR enzyme .  …
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A More Intuitive Phytozome Interface
… for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse … Phytozome v12, and that most bookmarked v12 links (e.g., to gene reports and organism information pages) will be … https://phytozome-next.jgi.doe.gov/info/Ptrichocarpa_v3_0 . Gene pages will also be forwarded (e.g.,  Gene …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of life. …
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Mining Metagenomes for Cas Proteins
… The ability to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) has applications across many areas. In particular, gene editing is being used to develop drought, flooding, …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… But what trends govern those virus-host interactions? Do generalist viruses run rampant, capable of infecting … lyse all those local hosts, they’d likely have a hard time finding more. …
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Biodesign
… into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … JGI Biodesign platform enables users to validate hypotheses generated from mining genomic data by designing and …
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JGI Announces 2025 New Investigator Portfolio
… including the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere microbiomes, …
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Rex Malmstrom
… isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to culture these … interactions in the hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct … Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. ISME …
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Alabama A&M Interns Access An Abundance of Knowledge
… Ti’Yanna Watson : Hi, I’m Ti’Yanna Watson, a senior biology major and currently attending Alabama A&M University, and I …
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