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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… nine-week virtual internship. The celebration was preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders of this … UC Merced students is a fantastic component of our work,” said Nigel Mouncey, JGI Director. “This year is unlike any …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… different campuses with this being our largest and most successful one. It’s proven to be a really good model for us … relevant are service and respect, and I live these values by being able to pass along my knowledge to them as best as possible in a safe environment” This not only helped her be successful as …
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JGI Scientists Pen Genome Watch Articles
… are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature Reviews … who leads the  Microbial Program at the JGI, received a message from Andrea Du Toit, senior editor for  Nature Reviews … Du Toit as their editor. The partnership has proven so successful this year, JGI is providing another three Genome …
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Introducing New Members of the JGI User Executive Committee
… ecologist Gilbert at the University of California (UC) San Diego, being on the UEC is an opportunity to help … She aims to help overcome common user bottlenecks in access, analysis and sharing of JGI-generated data. She is … for proposal calls as an opportunity to broadly increase access. He aims to be an advocate helping both the scientific …
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SPRUCE-ing Up Science
… carbon-sucking ecosystems on the planet,” Lawrence said. For Lawrence, this work is fundamentally meaningful … was coalescing. Lawrence applied for and was accepted as one of the first interns in the program . “There … As a part of his internship, he was regularly tasked by his mentor to present his project work and navigate a …
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A User-Centered Approach to Accessing JGI Data
… launched last year, it was only accessible through the plant portal  Phytozome . Now the … of ‘baseline metadata’ across the files that are submitted by each scientific program,” he said. “If each kingdom submits the same category of data …
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A Community Resource for Secondary Metabolite Researchers
… core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and … it is a BGC repository that aspires to FAIR (findable, accessible, interoperable and reproducible) principles and … comparable database, and has the capability to store and accurately display eukaryotic and viral BGC sequences. …
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A One-Stop Shop for Analyzing Algal Genomes
… harnessing algae for bioenergy and the greater bioeconomy. By bringing together publicly available genomic data on … to sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data … of more than 100 sequenced algal genomes — many sequenced by the JGI — so researchers can easily explore the …
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Statement on the Use of Genomics Data
… committed to advancing the field of genomics through open access to resources and promoting data sharing to accelerate … discovery and maximize the benefit to society. Inspired by the Human Genome Project (HGP), and building upon the … recognized the need to engage the community to inform necessary changes to JGI data policies. Since completion of the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… and structure following a genome duplication event that occured some 60 million years ago. Massive gene loss, rampant … for bioremediation, new agricultural applications or life-saving drugs. A better understanding of its genetic … They found over seven million repetitive elements that account for 85.2% of the C-fern assembly. While they did …
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Making a Lichen Together
… are able to partner to form lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could … the fungus and alga, either separately or together, on nitrocellulose filters in Petri dishes. The scientists also … this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer would have …
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VEGA Symposium
… Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics … on Nov. 18 in the Tilden room and open-air patio of the same building.  The symposium will include a mix of plenary …
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