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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP allows researchers to go beyond understanding which microbes are present in a sample, to …
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JGI Accepts 17 Proposals for Community Science Program
… Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are adapting to stresses. A … State University and colleagues aim to understand how soil microbiomes in fire-adapted ecosystems respond to low and …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria … for roughly two-thirds of antibiotics, and a deeper understanding of the bacteria potentially holds the key to … of researchers with a broad range of experience in this field.     …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … analysis techniques) and utilizing these resources to understand genome organization and regulation, abiotic … and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts comparative …
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory … Berkeley Lab.  Building on the momentum of a Memorandum of Understanding (MoU) signed between UDE and Berkeley Lab in … are excited to continue our fruitful collaboration in the microbiome space that has resulted in many impactful papers …
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science … “The proposed research by these PIs will address a broad diversity of important scientific questions relevant to the … algal functional genomics, inter-organismal interactions, understanding natural communities important for carbon …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … of Wisconsin-Madison, for over 20 years in order to better understand how the freshwater ecosystem works. When she set … They may also provide a basic understanding of the roles microbiomes play in determining the behavior of the physical …
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JGI & KBase at PAG XXVII
… your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … genomic sequence information to BER-funded activities of plant systems that make use of these resources will … Changes during Leaf Senescence in  Populus 8:03 PM Natural Diversity in  Setaria  and a Novel Gene for Shattering   In …
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Access to Rock Star Scientists
… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI …   “This summer internship has broadened my skills and understandings in the field of genomics. This has reinforced my goal to pursue a …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  Through the  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … on the JGI plant data portal Phytozome. The combination of field data and genetic information has allowed the research … species whose complex genomes are helping breeders understand how they can boost crop productivity and develop …
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