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Leo Baumgart
… joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … team responsible for piloting and operationalizing new genomic technologies, integrating automated liquid … pipelines to transition bench-scale methods into production workflows. He developed and scaled the multiDAP-seq assay, a …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality genome and now crop researchers … assembly not only includes a full representation of the diversity present in R570 but shows the genomic effects of … The work (proposal: https://doi.org/10.46936/10.25585/60001084 …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean …
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10 From JGI on the 2019 Highly Cited Researchers List
… has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list … Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category Microbial Program head Tanja Woyke , Biology & Biochemistry …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … to evolution of genomic mechanisms — resulting in the diversity of fungal phenotypes and a myriad of ecologies.” …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell (Neochromosome) have worked to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be …
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi Isimikalu, Todd H. Oakley, BJ Philmus and Aaron M. Roshotte; [Below] Paul Scesa, Kathleen Scott, Tiffany Taylor, Setsuko Wakao … crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse group of … family of enzymes is critical to the synthesis and broad diversity of terpenes. Until recently, studies of the TPS …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help … of Science User Facility. Y. lipolytica is a tantalizing microbial factory, capable of turning abundant biomass …
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An Automated Tool for Assessing Virus Data Quality
… and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … from IMG/VR , a database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to reveal how these systems adapt and contribute to global …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less … originated in Japan before spreading around the globe. Now, scientists have shed light on both when and how eelgrass … from Japan to colonize the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese …
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