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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for …
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Tomas Tyml
… Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) … Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … regarding use of our search API. They have expressed an interest in using this to find files based on file metadata …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This … through their long standing internship program. In just two months, the students participated in networking … distachyon root transporters in plant-microbiome interactions ” Cory-James Pugne-Andenoro : “The best part of …
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The fungus that made itself at home
… The Science By comparing genetic information from similar organisms, researchers have gained insights on why the dry … damage the wood in homes, bioenergy researchers have been interested in harnessing the brown rot Serpula lacrymans … inside homes, and in an environment that offers limited interactions with wild relatives. …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists … these bacteria evolved could help inform engineering microorganisms for biofuel production and other sustainable … study published in  The ISME Journal     focused on a class within  Chloroflexota called  Dehalococcoidia . Some  …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… a strategy to recover high value products from human waste. They   genetically modified yeast to efficiently … The Impact Biomaterials are materials produced by living organisms. The collaboration between the JGI and the Foundry … other materials for industrial processes.  To increase the interest in urine diversion processes, JGI and Foundry …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of … the roles of microbial communities in carbon cycling, in interactions with plants, and as drivers of methane …
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Back in the Lab: the 2023 Summer Intern Experience
… This summer marked the first fully in-person internship experience in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave interns the opportunity to be fully immersed in not only …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them … promote diversity and inclusion in the sciences, among the interns were two undergraduate students and two graduate …
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