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This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. … a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …

Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have … approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the …

Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can … more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This …

The latest edition of the JGI Progress Report highlights notable … is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon … by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat …

…   To understand virus-host dynamics, computation helps fill in what … be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus …

Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above … Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … race was being waged. In this JGI@25 video, Susan Lucas, former JGI Production Department Head and current ESnet … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …

Puerto Nuevo is a small town along the Baja California coastline in Mexico. … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada …