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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … in the journal  Developmental Cell and provides a community resource that could help researchers track cell development … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who … synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … researchers from the Bigelow Laboratory for Ocean Sciences, Microbial Genome Program head Tanja Woyke of the U.S. … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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What Happens Underground Influences Global Nutrient Cycles
… Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the … Research (BER) to harness the combined expertise and resources of two of the national user facilities stewarded …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture experiments showed …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… alternative fuels from plants is the high cost and resource requirements of processing these sturdy materials, … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … can thrive in saltwater mitigates concerns about diverting resources such as arable land and fresh water. Summary On …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale …
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Peatland microbial community responses to plant functional group and drought are depth‐dependent
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Impacts of The Wetland Sedge Carex aquatilis on Microbial Community and Methane Metabolisms
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