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The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us … Journal.  this study included the discovery of candidate genes that confer resistance to citrus greening disease. …

… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … was discovered with proteomic analyses. The species harbors genes encoding SPEARE proteins—which contain  s erine  p …

… processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … spatial transcriptomics, and cell- and cell-free expression platforms.  … We closed our 2018 Strategic Plan … from this review, I can say that a key area for the JGI’s evolution is in how we manage our data and how we can make …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … contains about 6% of the human genome . They discovered genes linked to conditions such as cardiovascular disease, … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …

Pictured is a timelapse of the Integrative Genomics Building … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …

… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … because it allows researchers to delete or activate certain genes and assess how these edits affect functionality.  …

… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … these sequences may be tainted by the presence of non-viral genes. Up to this point, there has been a lack of fast and …

Uncovering associations between plant roots and fungi that can help … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in fungal-host interactions and …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

Since joining the DOE Joint Genome Institute in 2016, Dr. … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … which metabolites. … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … to providing a more detailed timeline of eelgrass’s evolution, the study also shows the younger meadows in the …