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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … Publication: Tyler BM et al. Phytophthora genome sequences uncover …
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A User-Centered Approach to Accessing JGI Data
… (https://data.jgi.doe.gov/) launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide …
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Improving the Cacao Genome and Phytozome
… brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production in 2017-2018  was … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:                   General attendees: $500    … for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their joint … are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to advancing …
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VEGA Symposium
…   Register here  Registration fees:  Early Bird rates available now General & Berkeley … Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will take place November 18-19, 2026 on … campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” …
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Waiting to Respire
… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … The research teams opted to collaborate on a single study, with Matheus Carnevali and Schulz sharing co-first …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Program was brimming with excitement and determination as they came onsite. From data carpentry to science … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( … maize. By deciphering the zealexin synthesis pathway, this study makes it possible to harness the protective function … AFRI (1758976 to A.H. and E.S.) for sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  (LBNL and external): $400  …   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … Art at the University of Nevada, Las Vegas. The poster session will be held on November 4 at the National Atomic Testing …
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Tracking the Origins of Methane-Producing Microbes
… Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … is typically observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with …
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