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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using microbial understanding to formulate a vaccine for …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach places that are considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … role in soil carbon storage. Summary There are three types of fungal saprotrophs in the forest. White rot can break … assist researchers in moving toward functional genomics studies to learn more about the inner workings of plant-host …
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VEGA Symposium
… campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” … uncultivated viral diversity, understand the role of viruses in natural ecosystems, and functionally explore … be held on Nov. 18 in the Tilden room and open-air patio of the same building.  The symposium will include a mix of …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in …
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in support of user science.  Capabilities offered by the platform are a …
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JGI announces 2025 Functional Genomics awardees
… Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who … crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into … for 2025.  Proposals are accepted year-round ; the next deadline is Jan. 29, 2026.  …
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Soil virus offers insight into maintaining microorganisms
… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … to another, which can have a significant impact on the microbial communities within soil. Using metagenomics, … sequences were retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG …
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BIGMAC : breaking inaccurate genomes and merging assembled contigs for long read metagenomic assembly
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Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … aim to inform the engineering of stable, synthetic microbial communities to take advantage of their joint …
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