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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a … of biology and computer science, to reveal clues about how microbial and bacteria communities influence the …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Genomes to Structure and Function focus area of the JGI’s DNA Synthesis Science Program help advance DOE … interests in the biotechnology innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the …
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A Community Resource for Secondary Metabolite Researchers
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First …
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Fungal Friends or Foes in Plant Roots
… determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Communications paper . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are accessible on JGI data portals including the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing …
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Mapping the Earth’s Hidden Fungal Kingdom
… with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of tackling this … and biomaterials,” said Igor Grigoriev, head of the JGI’s Fungal and Algal Program and co-author of the paper. …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Eelgrass Proves to Be Much Younger Than We Thought
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile … in soils and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … reinforced by the  Fort Lauderdale Agreement (2003), the JGI recognized the need to engage the community to inform necessary changes to JGI data policies. Since completion of the HGP, the JGI has …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which … cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls microbial colonization, which can affect pathogenic and …
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