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From Berkeley to Binghamton: Tracking Strawberry Evolution
… a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … off their early collaborations that could help crop breeders and researchers predict how crops and model organisms …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of Duisburg-Essen (UDE), … from the ACTIVE SITES Research Center (ACSI), the Centre for Water and Environmental Research (ZWU) of the University …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship … program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the …
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Eelgrass Proves to Be Much Younger Than We Thought
… eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the … events. It was previously assumed, due to the wide and varied geographic footprint of the plant, that eelgrass began … to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. Eisen, J.J.S. …
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Enlarging Windows into Understanding Gene Functions
… affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … of these four letters represents an organism’s genetic code, or genome, which underlies physical features and …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, … is a rich source of the sulfur they need to grow and divide. Similar to the bacterial enzymes that fix nitrogen — … overexpress the MAR enzyme, and leveraged affinity chromatography to isolate it. The JGI provided a range of constructs …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past summer. This year’s cohort for the JGI-UC … Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, … to advance foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    … advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science …
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Leo Baumgart
… 2018, following his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … bench-scale methods into production workflows. He developed and scaled the multiDAP-seq assay, a method that …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … Genome Institute, Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic components required for effective colonization. In addition, Dr. Cole is …
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