Search

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … would it be possible to add a feature to look for synteny of the target genome with itself, to identify regions that …

… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in … spectrometry (LCMS).  We do a hydrolyzation of the DNA and we look and quantify the isotopomers. We …

… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … ). “We have made a concerted effort to create a common set of ‘baseline metadata’ across the files that are submitted …

… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with others to develop healthier … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… from The Ohio State University and the University of Michigan studying how virus infections cause significant … metabolic changes they’ve undergone. The Impact The number of microbes in, on, and around the planet is an astronomical … As part of efforts to characterize global microbial diversity with an aim to improve predictive ecosystems …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … 1 billion years of evolution in Kingdom Fungi — from phylogenetic relationships to evolution of genomic mechanisms — resulting in the diversity of fungal phenotypes and a myriad of ecologies.” …

… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … than any individual genome highlighting the fact that the genetic information in a single reference genome is … Plant Biology (Austria); Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben …

… Over 40 percent of the cereal crop’s genes respond to drought stress. The … to produce good yields under water limiting conditions. Epigenetic Control of Drought Response in Sorghum (EPICON) is a … and how these conditions impact the crop and its microbiome. For three consecutive years (2016-2018), …

… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant representatives of deep subsurface ecosystems. A team of researchers … code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating short sequences from …

… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … surface where algae grow. Armed with a better understanding of the alga’s stress resistance and ability to adapt to … production and natural fertilizers. By understanding the genetic and metabolic pathways involved in stress responses, …

… to a new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have … plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including researchers at the Joint …

… to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the development and application of advanced mass spectrometry approaches and model laboratory ecosystems (EcoFABs). … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …