Results

De novo Nanopore read quality improvement using deep learning
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes contribution of …
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s …
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used … metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? … Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence …
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