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Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … public database for the research community. With more than 13 million BGCs in the catalog at the time of … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …
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Tomas Tyml
… Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding …
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The JGI Data Portal: Improving User Experience
… download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is currently only accessible via Phytozome, the improvements it encompasses are more broadly applicable to the download processes from the … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … enabling scientists to see what molecules they produce. For more on this feat, see this Lawrence Berkeley National …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … Executive Committee, on how that study went from the lab to the classroom. …
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Better Genome Editing for Bioenergy
… team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … of producing sustainable fuels from alternative sources. Moreover, the team says the approach they used to validate …
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Multi‐omic analyses of exogenous nutrient bag decomposition by the black morel Morchella importuna reveal sustained carbon acquisition and transferring
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for … its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … and objectives for the next five years. It also includes more than 130 implementation milestones to help track and …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources … with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … FICUS proposals have helped advance her research. Learn more  here about the “Facilities Integrating Collaborations …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding … then co-culturing isolated viruses in eukaryotic  microbial hosts. Lately, researchers have used … range, morphological structures, and infection strategies. More recently, employing cultivation-independent approaches …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product … mass spectrometry research products such as stable isotope probing (SIP) to assess metabolite turnover, DNA-SIP …
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