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How Microbes Can Protect Plants in Drier Straits
… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from … how individual microbes interact with each other in a community, and characterizing their individual … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research … Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. Click to learn more about the program's areas of …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per year. This … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick … the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? This …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring … studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s … group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small plastic growth chambers let researchers … well in the classroom. This episode, we visit Los Medanos Community College to see EcoFABs in action in Jill …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring … The Science Soil bacteria in the genus Streptomyces are nature's chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under …
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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons … to serve on the UEC. For microbial ecologist Gilbert at the University of California (UC) San Diego, being on the UEC is an opportunity to help develop the JGI’s community outreach efforts with diversity, equity and …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … the next deadline is July 31. You can learn more about our Community Science Program here .  …
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