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Gut Fungi: Unexpected Source of Novel Chemicals
… — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … meal. In their evolutionary history, these fungi branched off early from aerobic fungi, which can breathe oxygen — …
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2025 NeLLi Symposium
Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … computational advances, and other technological developments leveraging recent progress in AI/ML that will … Immediately following the NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving …
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JGI & KBase at PAG XXVII
… collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … Research (BER) Plant Genomic Science on current and ongoing developments toward integrative biology. Researchers who are …
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A Collaboration to Improve Plant Genome Annotations Across Species
… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … conditions available for a species. You can also look at its co-expressed genes. It provides detailed functional …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous … research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … to make products such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As … cell) efforts of this work when it started. Though such visits have been impossible for the past year and a half, “the …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been …
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Accelerating Metagenomics Discoveries with Deep Learning
… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … into multiple interconnected layers. The architecture of these algorithms, inspired by communication networks …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… from the panel discussion  here . Contact  Robin Johnston for followup questions.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in biomass each year … cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or …
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Webinar: Introducing the BioSANS capability
The BioSANS instrument is at the Center for Structural Molecular Biology (CSMB) at Oak Ridge … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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You Can Move, But You Can’t Hide
… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in …
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