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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … genome for the sugarcane cultivar R570 has been  published in  Nature by an international consortium. With the genetic code … conducted by the USA Department of Energy (DOE) Joint Genome Institute (https://ror.org/04xm1d337), a DOE …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for … of the increasingly collaborative and multidisciplinary nature of DOE mission science projects, this proposal call …
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … forest fungus Laccaria bicolor was published in the journal Nature . The mushroom has a symbiotic relationship with the … Genome Inside: THE Bioenergy Tree …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI … every aspect of our daily lives.  But for researchers who study viruses that infect organisms much smaller than … and nitrogen cycles. Currently one of the best ways to study such viruses is by sequencing the bulk DNA or RNA …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of … then co-culturing isolated viruses in eukaryotic  microbial hosts. Lately, researchers have used … and how sequencing and bioinformatics have sped up the study of giant viruses. The Impact In their existence as …
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Help from Citrus’ Bitter, Hardier Cousin
… to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never … JGI collaborator, are senior authors of the  recent study published in  The Plant Journal.  this study included the discovery of candidate genes that confer …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically … was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools … author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s lab, and he worked …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, University of California, San Diego … Graham, Ramon Huerta, Ryan Johnson, and Lev Tsimring. "Microbial microfluidic biosensor." U.S. Patent 11,209,412, …
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