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… Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … Associated Microbes and Parasites. Ul-Hasan credits her JGI-UC Merced summer internship for helping lay the … more advanced in my understandings than I would be at this stage without the internship and mentorship that followed. I …

… So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the … In this episode: the software evolution that made metagenome assemblies like this possible. …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on workshop is designed to …

… by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a targeted technique called virusFISH. Using fluorescently tagged probes, the team was able to visualize the behavior …

… Researchers at the JGI develop a tool to quickly and accurately identify mobile … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to …

… Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data … Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from …

… Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi Otani. Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …

… of multiple omics data from various environments — that JGI users can leverage to create a more complete picture of … with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … Streptomyces species or related microbes can work with the JGI to apply the same integrated approach to unlock useful …

… JGI researchers demonstrate how their laboratory and data …