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Multi-omics reveals nitrogen dynamics associated with soil microbial blooms during snowmelt
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  (LBNL … discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a continuation of the previous … lineages in biogeochemical cycles and beyond, as well as microbial symbioses. We aim to foster discussions centered …
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First Monoploid Reference Sequence of Sugarcane
… genome . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple … gene models were predicted with more than 80 percent found to be colinear to comparable regions in sorghum. Based … This work was supported by the International Consortium for Sugarcane Biotechnology, as well as the …
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Virus-Microbe Interactions of Mud Island Mangroves
… University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David Paez-Espino. Rambo found the SCGSR research experience was “an ideal …
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Webinar: PhycoCosm Tutorial
… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever … rate for CSP? What makes a successful CSP? A: Reminder: two calls for proposals are open right now – large scale CSP …
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New and Improved: Eucalyptus Reference is Now Accessible
… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference … annotation completement level of 99.4%.  In comparing the two assemblies, the researchers also noticed that the 2025 … 70–90 Mbp smaller than the 2014 reference, though they have similar numbers of genes. The team hypothesizes the …
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Sequencing Technologies & Products
… which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular … An assay used for profiling transcription factor binding sites across entire genomes. This … high-throughput processing of samples in 96-well plates on automated liquid handler platforms, substantially …
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Ice cover extent drives phytoplankton and bacterial community structure in a large north‐temperate lake: implications for a warming climate
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Amplicon sequencing of ice and water phytoplankton and bacterial communities during an extreme winter in a central Canadian great lake
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