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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this … – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the JGI …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … Woyke et al. 2006. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 443, 950-955.   … … User Programs … Education … Awards and Service … Selected Publications …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … viral diversity. “Although the technical challenges of data analysis at this scale are formidable.” Computational Sieves …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. S.C., B.K., and I.V.G. were supported in part …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can browse the … microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … Head at the JGI.  Along with an improved understanding of multiple forest systems, this work sets up protocols and … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of … These kinds of data could open opportunities along multiple avenues, including agriculture, climate modeling, …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of …
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JGI Scientists Pen Genome Watch Articles
Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … of Genomic Variations … Comparative and Functional Genomic Analysis of Genus Roseovarius … Implementing a Scalable …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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