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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … in the haloarchaeal gene pool, a team led by University of New South Wales (UNSW)-Sydney professor Rick Cavicchioli … cycles, and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean Sciences described a novel technique to access … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the …
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Genome Sequence of Roseovarius sp. Strain MCTG156(2b) Isolated from a Phytoplankton Net Trawl on the Scottish West Coast
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the … Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal … a proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can identify … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the … communication and technical writing while also making new connections with both researchers and other interns. At … Hour mentioned that she had gained knowledge in bioinformatics and machine learning. “Also,” she added, ”I’ve …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since … “When we proposed to do the Mendota time series, we knew that it was going to be more samples and more data per … Large metagenomic surveys could lead to better predictive models of global climate. They may also provide a basic …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … mechanisms of sex determination could also lead to new approaches to accelerate flowering, which can speed the … This work was supported by the NSF Dimensions of Biodiversity Program …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles … surface of plants, is a comparatively understudied area of forest ecosystems as past studies have mainly focused on … the JGI here . Bennett is applying the same experiment to a new environment. She is currently working on her thesis to …
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