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The genome of the polyextremophilic yeast, Naganishia friedmannii, reveals adaptations involved in stress response pathways, carbohydrate metabolism expansion, and a limited DNA repair repertoire
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2025 Progress Report
… demonstrate how their laboratory and data science efforts support users, advance foundational science and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … the viruses to better understand their roles and potential impacts. The work is supported by NIH Common Fund grant … and understanding viral genomes and their interactions with microbial hosts. The second project, “ A consortium …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… tools for large-scale assembly and analysis.   To put these efforts into perspective, we caught up with JGI staff, … Podcasts ,  Spotify or wherever you get your podcasts) Microbial ecologist and JGI user Trina McMahon has been …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… in the collection, Genomics-enabled analysis of specialized metabolism in bioenergy crops: current progress and … as a biochemical factory.  “These large-scale research efforts are accelerating the transition into real-world …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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Community ecology across bacteria, archaea and microbial eukaryotes in the sediment and seawater of coastal Puerto Nuevo, Baja California
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