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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … as a computational biologist. My primary future goal is to form a startup.” …
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … DOE Joint Genome Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … attempted to make sure users will continue to have straightforward access to all the data in Phytozome v12, and that …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish … Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo …
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … microbes. The new technique is another tool for microbial ecologists to learn more about the diversity … Laboratory and the U.S. Department of Energy. Support for this research was also provided by the Great Lakes …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … State University, which archives and makes available for research over 100,000 samples and specimens of over 60 …
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Charting Progress toward Professional Goals
… from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … next generation of STEM professionals. Students can apply for internships and work onsite with an experienced … while Oliver Benelli applied through the University of California's  CalTeach initiative. During their time at the …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. Tolkien’s “The Lord of the Rings,” the Hornburg fortress had withstood all attacks – until the Battle of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … and Liability Act (CERCLA) was enacted by Congress in 1980 for Superfund sites which are hazardous waste areas that …
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The fungus that made itself at home
… new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have gained … rot Serpula lacrymans towards breaking down plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the …
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