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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate details of … and manipulate the human language—are well positioned to help enhance our understanding of life’s genomic code, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made … relying on different ways of living. The Impact Microbes help regulate the global carbon cycle — fixing, … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Soil virus offers insight into maintaining microorganisms
… portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative … data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … thereby affect climate. The protein itself could actually help promote soil health. Summary Soil viruses are a …
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JGI@25: Building a Better Bean
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. While a hill … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online …
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JGI-UC Merced Interns Share Their 2021 Experiences
… UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science … inspiring students to embark on a career in genomics and to help foster a diverse future workforce in science. To learn … Evolution of the Mitochondria Internship …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular … (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …
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A User-Centered Approach to Accessing JGI Data
… year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. Eventually, he added, the Genome Portal will be retired once the same features are …
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A Plantiful Future: Xiaohan Yang
… Can plants help humans attain a renewable energy future? Can they help … Xiaohan Yang, a scientist at Oak Ridge National Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of different plant species …
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Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium
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