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… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … quantitative analysis strategy for stable isotope probing metagenomics . mSystems , … Eloe-Fadrosh, Emiley A. et al. (2016)  Metagenomics uncovers gaps in amplicon-based detection of …

Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … In working toward a shared vision with members of the JGI advisory committees, we welcome and encourage …

… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …

Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional …

Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …

Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? …