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Microbial communities associated with sympagic and planktonic habitats during a polar vortex influencing the North American Great Lakes Basin
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … Proposals for the annual FICUS call with EMSL begin with a Letter … staff of the participating User Facilities, as well as DOE. Nearly all LOIs are accepted for full proposal submission, …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex sugarcane genome . The … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, … sequence, and knowing that there was a high level of colinearity between the two crops, which meant most genes in …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information … Our research focuses on the assembly of metagenomic sequence data … qSIP quantifies incorporation of isotopes from labeled nutrients …
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Decrypting bacterial polyphenol metabolism in an anoxic wetland soil
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics
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Discovery of enzymes for toluene synthesis from anoxic microbial communities
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Stimulation of dissimilatory sulfate reduction in response to sulfate in microcosm incubations from two contrasting temperate peatlands near Ithaca, NY, USA.
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. … So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into soybean’s …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … but use sunlight to help in the struggle to survive near the surface. The other two ecotypes, on the other hand, …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a … point: for us, the smell of the ocean simply signals we’re near the beach. For bacteria, that salty, slightly stinky … isolate it. The JGI provided a range of constructs based on sequences for MAR enzymes from different organisms to …
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