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Frequently Asked Questions: Proposal Submission
… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  However, users … missions .   The USDA, NSF, and NIH all operate sequencing programs, and potential users are urged to contact these …
Learn more
Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … Metabolomics. Strong internal collaborations with  Science Programs and  Operations enable the JGI to focus on …
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Partnerships: Myco-Ed
DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … The … analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no programming knowledge or … … What is MycoCosm? … Myco-Ed Partnerships … Are you or your institution interested in becoming part of Myco-Ed? …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … JACKIE: Well, how about you just give us a little bit of your background because you do-- you're classically trained … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …
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Natural Prodcast Episode 17: Cassandra Quave
… people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … do is really look for opportunities through grant funding programs to build up research capacity with our global … or so. But JGI, our focus as a DOE, Department of Energy, user facility is in energy and environment, and not …
Learn more
Natural Prodcast Episode 13: Francisco Barona Goméz
… thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published … of Energy Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National Lab. You … collaborate, let us know. Find out more at jgi.doe.gov/user-programs . Thanks and see you next time. … Episode …
Learn more
Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … JGI products and services while nurturing a fresh cohort of users Reach the next generation of genome scientists and …
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Single Cell Research Group
… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of …
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New Lineages of Life Group
… (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …
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Natural Prodcast Episode 4: Nancy Keller
… actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You … collaborate, let us know! Find out more at jgi.doe.gov/user-programs .   Thanks, and see you next time!  … Episode …
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Natural Prodcast Episode 2: The Primer, Part 2
… have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … have definitely learned a valuable historical lesson. Know your secondary metabolites!  DAN: One of the things that I … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …
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