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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … into practical applications, including sustainable biofuels, biomaterials, natural products, and environmental …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… r ecombinase- a ssisted  g enome  e ngineering ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, processing and visualization of “big data,” and … approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … diversity quickly, allowing these viruses to target new microbial prey. The Impact This research provides a much … sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … including areas where more or less capacity is needed, new capabilities desired, or capabilities that could be … roles. The three Chairs are responsible for preparing the agenda of UEC meetings in coordination with the JGI Director …
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New Tricks with Old Bones
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Plant Pan-Genomics Comes of Age
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize … metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical …
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New and Improved: Eucalyptus Reference is Now Accessible
… for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … both haplotypes, meaning it separately represents the sets of chromosomes inherited from each parent. It also has …
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