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DNA Synthesis Program
… DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in … biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The program …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base … photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … Pacific fisheries, because of eukaryotic phytoplankton — not prokaryotes,” said Thomas Mock, marine microbiologist at …
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A Viral Ecogenomics Framework To Uncover the Secrets of Nature’s “Microbe Whisperers”
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JGI Advisory Committees Code of Conduct
… working toward a shared vision with members of the JGI advisory committees, we welcome and encourage openness, candor, … by a positive, constructive and professional mindset, so that together we can foster a respectful, collaborative … the trust of our stakeholders. These stakeholders range from scientists to members of the public whose tax dollars …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop … learn the value of their item. Part of that pleasure comes from finally having an answer to the question, “Why bother … now available for male and female plants of fire moss. Most notably, the work revealed that the U and V sex chromosomes …
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JGI@25: From Life at the Extremes to Editing Genomes
… 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Data Ecosystem
… its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at … Regularly Interspaced Short Palindromic Repeats (CRISPR) associated proteins that can target single-stranded DNA … ability to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or … fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … the lobby have many reasons for being there, but they’re not always immediately apparent. Similarly, the microbes …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found … 15 core genes shared across all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over …
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Game On: High School Students Drive Everglades Metagenomics Study
… under the JGI Director’s Science Program. The class did not know at the time that the project had already received enthusiastic support from the JGI Director, Nigel Mouncey. Jonathan credits his … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Metabolomics
… identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules … JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … they grow, as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified …
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