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Enabling pan-repository reanalysis for big data science of public metabolomics data
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … we nurture in our workplace and seek to establish with our stakeholders. In working toward a shared vision … The JGI Leadership Team : Nigel Mouncey, JGI Director Massie Ballon, Communications & Outreach Manager Tina …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … to the second episode of the Natural Prodcast. This is part 2 of our “primer” episode, so if you ended up here somehow without having listened to the first part, you might be a …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … found inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever … fungal mitochondrial genome reported before this study. A statistical comparison of evolutionary trees built from …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary metabolism … that were different, different structure types. We started amassing a collection of marine bacteria. We also studied …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … lucky to get some time to sit down and have a great chat with him.  I kind of lost count of how many times Brad used …
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Integrative analysis of multimodal mass spectrometry data in MZmine 3
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A universal language for finding mass spectrometry data patterns
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Plant Program
… With collaborative user projects, the JGI’s Plant Program … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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Multiplex Editing of the Nucleoredoxin1 Tandem Array in Poplar: From Small Indels to Translocations and Complex Inversions
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the platform delivers … over 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced …
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Morphology-Driven Control of Metabolite Selectivity Using Nanostructure-Initiator Mass Spectrometry
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