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Secondary Metabolites Program
… algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … and their roles in the environment, can unlock new avenues for bio-based products and bioenergy crop enhancement. The … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Synthetic Biology Lab
… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design … ever-higher levels of throughput. We also develop methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The …
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Natural Prodcast Episode 5: Brad Moore
… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … Oceanography. And Brad and I, Alison, have known each other for quite a while because Brad was my postdoctoral advisor.  … Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they worked with us to sequence two …
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Amplification and adaptation of centromeric repeats in polyploid switchgrass species
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Multiple displacement amplification compromises quantitative analysis of metagenomes
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JGI Portals
Our data platforms are a key resource for the broader scientific community and require constant … all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …
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Webinars on Offerings & Capabilities
… understanding the capabilities and resources available for your project. Watch all the webinars here . You can find … … … Shining a Light: Advanced Photon Source Capabilities for FICUS Research shows researchers how to tap into the …
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Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
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Decontamination of MDA Reagents for Single Cell Whole Genome Amplification
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Taking Stock of the Known and Unknown Microbial Space
… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We … key roles in regulating global nutrient cycles. The information gained from understanding the interactions between …
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