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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … And so one of the ways I used to think about it when I was teaching is: bacteria might have different lifestyles. There … like, you know, like an organism. They have specialized cells and the ecology there is really fascinating, probably …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. … to make an argument for the use of biological systems to leach and concentrate less valuable metals or elements not …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant organisms. We …
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Industry Engagement Program
… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information … will generate third-party validation of NewLeaf’s microbial plant growth promotion technologies.  …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes … data (the 136 tetranucleotide frequencies for each of the 12,063 metagenomes) and reduce it into two axes … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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CSP Functional Genomics
… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … For general questions, please reach out to Christa Pennacchio, Project Management Office. …
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Natural Prodcast Episode 9: Roger Linington
… products field as it relates to structure elucidation and genome mining, and how we might start to better connect … drug discovery, predominantly in diseases of importance to each host country. It was built very much on the foundations … in that set, and how those unique molecules are distributed within the set, then it would be a lot easier to start to …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … Impact Understanding how individual microbes interact with each other in a community, and characterizing their … individual genomes, particularly from incredibly complex soil microbial communities, is crucial to …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … students from Boca Raton Community High School in Palm Beach County, Florida. The class sought to apply the latest …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Partnerships: Myco-Ed
… of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics exercises …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… standing taller than basketball star LeBron James. In each garden, switchgrass plants clonally propagated from … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced …
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