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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … And so one of the ways I used to think about it when I was teaching is: bacteria might have different lifestyles. There … like, you know, like an organism. They have specialized cells and the ecology there is really fascinating, probably …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… standing taller than basketball star LeBron James. In each garden, switchgrass plants clonally propagated from … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced …
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Offerings & Capabilities
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Examples: Successful LOIs & Submissions
… genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during … bioenergy crops … Characterization of simplified soil communities with high and low carbon use efficiency across … and trophic interactions in Antarctic cryptoendolithic communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look around the space, use the …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … students from Boca Raton Community High School in Palm Beach County, Florida. The class sought to apply the latest …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a …
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Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … community, and promotes communication and collaboration within the user community. … The SAC is a board convened by … on the effective management and strategic objectives of the microbial and metagenome programs. The committee serves as …
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How to Submit Sequencing Samples
… outlined below. Click the drop-downs to learn more about each step in the process. If you have any questions, please … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. … between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … viruses: siphovirus PSA-HS2 and podovirus PSA-HP1. Each virus demonstrated a different approach to infecting …
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