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User Support
… specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
Learn more
Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … potential applications. By recovering population genomes from metagenomes, we gain insights into microbial … qSIP quantifies incorporation of isotopes from labeled nutrients into biomass. When paired with …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… The team learned that some bacterial families carry genes for degrading monoterpenes such as α-pinene, as well as genes for breaking down complex plant polymers. These … Stories Behind the Science: Decoding the Genes of Unseen Communities … From our partners …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular characterization … program. Letters of Intent are due March 17, 2021. Q&A from the Webinar: Q(uestion): Who can apply for this …
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DAP-seq Drives Robust Mapping of Gene Regulation
… of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring … in  Nature Plants  on July 15, researchers have developed multiplexed assays — experimental techniques that allow … in grasses as an example, where these ancient networks are recruited to help plants survive environmental stress.  …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical … more efficient microbial factories. Identifying specific genes, regulatory elements and metabolic pathways that … a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage to …
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Evolution of a Fungal Gene Expression Regulator
… Impact Interactions between plants and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is … the fungal tree of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that … – similar to the MAC clusters for 6mA), rather than in genes, which suggests that 5mC may play a role in genome …
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Community Science Program
… aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under … The ranked proposal list, along with a recommendation from JGI management, is then forwarded to DOE for final … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs … publicly available. If you're requesting DNA synthesis from JGI, there's also a material transfer agreement that’s … project with Molecular Foundry once you have what is needed from JGI.   …
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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User Programs
… projects that integrate the expertise and capabilities of multiple user facilities Investigators with DOE … and metabolomics. Proposals must request capabilities from both JGI and the Molecular Foundry.  Submission …
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Selinene Volatiles Are Essential Precursors for Maize Defense Promoting Fungal Pathogen Resistance  
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