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Soil exchange rates of COS and CO18O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … is our interview with Nadine Ziemert, from the University of Tübingen. This continues our short series of genome …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes … of the targeted metagenome sequence reads. This demonstrates the viability of HCR-FISH+FACS for selectively … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … Please review our FAQ in advance of contacting the PMO office.  …
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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … case, the machine “learned” to identify a certain type of bacterial viruses or phages called inoviruses, which are … functions such as virion structure and extrusion, and DNA replication and integration. The researchers also learned …
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Viral and metabolic controls on high rates of microbial sulfur and carbon cycling in wetland ecosystems
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … delicately above the leaf debris are revealed to be single bacterial cells, visible to the naked eye. The unusual size … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … is only available for a fraction of extant actinobacterial diversity. The article adds to the compendium … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The …
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